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Timeplan 2024 Vår - lærer Vanessa Molin Paynter - Stipendiat

Vanessa Molin Paynter

Uke 4
Mandag
Tirsdag
Onsdag
08:15-12:00 - 24.01.2024
Seminar
Genetikk seminar 1 - Torskeavlsprogrammet
1 GEN Sem 1

V. Dr. Anne Kettunen, NOFIMA

Rom:
ILP 2.005
Torsdag
Fredag
Uke 5
Mandag
Tirsdag
Onsdag
Torsdag
09:15-16:00 - 01.02.2024
Labgruppe
Genetikk laboratorieøvelse - Studentgruppe 1
Rom:
NFH D-208
Fredag
09:15-16:00 - 02.02.2024
Labgruppe
Genetikk laboratorieøvelse - Studentgruppe 2
Rom:
NFH D-208
Uke 6
Mandag
12:15-16:00 - 05.02.2024
Seminar
Genetikk seminar 2 - Presentasjon av laboratorieforsøk
2 GEN Sem 2

Hver lab-gruppe presenterer kort laboratorieforsøket, inkl resultat og diskusjon. Presentasjonen skal være 3-5 minutter. Bruk gjerne powerpoint. 

Rom:
NFH B-064
Tirsdag
Onsdag
Torsdag
Fredag
Uke 11
Mandag
Tirsdag
Onsdag
12:15-16:00 - 13.03.2024
Lecture
Basic statistics and coding interfaces
2
  • Statistics and data science (experimental statistics refresh) - 2h theory
  • Introduction to basic R and R-Studio – 2h practice
Rom:
NFH D-206
Torsdag
12:15-14:00 - 14.03.2024
Practical
Introduction to Linux
1

2 hours practice

  • Basic navigation inside the Linux environment
  • Linux command syntax
  • File and directory manipulation

Second assignment handout: Reproduce RStudio data treatment as a script in Linux.

Fredag
Uke 12
Mandag
Tirsdag
Onsdag
12:15-16:00 - 20.03.2024
Practical
Linux combined data wrangling
2
  • Types of data. Filtering and Reformatting - Tidyverse. 2h practice
  • Using R scripts for data manipulation in Linux (TA) – 1.5h practice
    • Third assignment: Create a R-toolbox for filtering and reformatting tables and make a Linux pipeline.
Torsdag
Fredag
Uke 14
Mandag
Tirsdag
12:15-16:00 - 02.04.2024
Practical
Data Visualization
4
  • Plotting tools for exploring big data. Plot use cases for different types of data. 2h theory
  • The Grammar of Graphics (ggplot2). 2h practice
Onsdag
08:15-10:00 - 03.04.2024
Practical
Data visualization scripts in Linux
5
  • Apply plotting scripts to generate PDFs with useful graphs (TA) – 1.5h practice
    • Forth assignment: Create a R script for making PDF files with data exploration graphs and execute this script from the Linux command line.
Torsdag
Fredag
Uke 15
Mandag
12:15-16:00 - 08.04.2024
Practical
Statistics for big data
6
  • Introduction to tidy models and machine learning using R. 4h practice
Tirsdag
Onsdag
10:15-14:00 - 10.04.2024
Practical
Modelling and Interpretation
7
  • Export model assessment data using R and Linux (TA) - 1.5h practice
    • Fifth assignment: Create a Linux script for exporting the model quality information graphs and indices and interpret the outcomes.
Torsdag
Fredag
Uke 16
Mandag
Tirsdag
Onsdag
08:15-12:00 - 17.04.2024
Practical
Genetics data and database
8
Torsdag
Fredag
Uke 17
Mandag
12:15-16:00 - 22.04.2024
Practical
Phylogenetics in R
9
Tirsdag
Onsdag
12:15-16:00 - 24.04.2024
Practical
Genetics of population
8
Torsdag
Fredag